Code

updates sparse scale#2942

Code

Merged

ivirshup merged 30 commits intomainscverse/scanpy:mainfrom inplace_sparse_scalescverse/scanpy:inplace_sparse_scaleCopy head branch name to clipboardApr 8, 2024

+356-232

Commits

Commits on Mar 22, 2024

• updates sparse scale

  Intron7

  committed
  0ee8601

  Copy full SHA for 0ee8601

• use prange

  Intron7

  committed
  a1662d1

  Copy full SHA for a1662d1

• adds release note

  Intron7

  committed
  e2652ad

  Copy full SHA for e2652ad

• adds csc tests

  Intron7

  committed
  250bbcc

  Copy full SHA for 250bbcc

• remove prange to avoid segfault in test

  Intron7

  committed
  b808433

  Copy full SHA for b808433

• switches csc to csr for mask_obs

  Intron7

  committed
  44018e7

  Copy full SHA for 44018e7

• update docstring

  Intron7

  committed
  501b8a4

  Copy full SHA for 501b8a4

• Merge branch 'main' into inplace_sparse_scale

  Intron7

  authored
  efd0e55

  Copy full SHA for efd0e55

• add kernel tests

  Intron7

  committed
  9cdf3e2

  Copy full SHA for 9cdf3e2

Commits on Mar 27, 2024

• update release note to performance

  Intron7

  committed
  fcca28f

  Copy full SHA for fcca28f

• Merge branch 'main' into inplace_sparse_scale

  Intron7

  authored
  119cde7

  Copy full SHA for 119cde7

• fixes end of file

  Intron7

  committed
  532333a

  Copy full SHA for 532333a

Commits on Mar 28, 2024

• updates so dask is covered with mask

  Intron7

  committed
  b06e9b0

  Copy full SHA for b06e9b0

• rework sparse scale

  Intron7

  committed
  95540de

  Copy full SHA for 95540de

• remove redundant line

  Intron7

  committed
  c9e2736

  Copy full SHA for c9e2736

Commits on Apr 2, 2024

• update complier_constant

  Intron7

  committed
  b1336f0

  Copy full SHA for b1336f0

• Merge branch 'main' into inplace_sparse_scale

  Intron7

  authored
  ba73360

  Copy full SHA for ba73360

• remove small oversight

  Intron7

  committed
  c0deab6

  Copy full SHA for c0deab6

• updates max_value

  Intron7

  committed
  35411aa

  Copy full SHA for 35411aa

Commits on Apr 3, 2024

• adds sparse kernel tests

  Intron7

  committed
  20b6d36

  Copy full SHA for 20b6d36

• update inner kernel

  Intron7

  committed
  87be224

  Copy full SHA for 87be224

• move scale out of simple

  Intron7

  committed
  8e6f52b

  Copy full SHA for 8e6f52b

• updates a dependency

  Intron7

  committed
  38cbd29

  Copy full SHA for 38cbd29

• caches the kernel

  Intron7

  committed
  894426b

  Copy full SHA for 894426b

• only use kernel if a mask is given

  Intron7

  committed
  3766925

  Copy full SHA for 3766925

• fixes an issue with max_value for sparse matrixes

  Intron7

  committed
  a1a0ffd

  Copy full SHA for a1a0ffd

• removes print

  Intron7

  committed
  43edd8a

  Copy full SHA for 43edd8a

• remove parallel

  Intron7

  committed
  5f91805

  Copy full SHA for 5f91805

Commits on Apr 4, 2024

• removee unused dependency

  Intron7

  committed
  99cd8a1

  Copy full SHA for 99cd8a1

Commits on Apr 8, 2024

• Move numba code to it's own method

  ivirshup

  committed
  35dd438

  Copy full SHA for 35dd438