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Automated GHA update
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GHA committed Jun 27, 2024
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10 changes: 5 additions & 5 deletions bin/windows/contrib/4.3/PACKAGES
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Expand Up @@ -288,7 +288,7 @@ License: GPL (>= 2)
Archs: x64

Package: cli
Version: 3.6.2
Version: 3.6.3
Depends: R (>= 3.4)
Imports: utils
Suggests: callr, covr, crayon, digest, glue (>= 1.6.0), grDevices,
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License: MIT + file LICENSE

Package: crayon
Version: 1.5.2
Version: 1.5.3
Imports: grDevices, methods, utils
Suggests: mockery, rstudioapi, testthat, withr
License: MIT + file LICENSE
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License: GPL (>= 2)

Package: digest
Version: 0.6.35
Version: 0.6.36
Depends: R (>= 3.3.0)
Imports: utils
Suggests: tinytest, simplermarkdown
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Archs: x64

Package: prodlim
Version: 2023.08.28
Version: 2024.06.25
Depends: R (>= 2.9.0)
Imports: Rcpp (>= 0.11.5), stats, data.table, grDevices, graphics,
diagram, survival, KernSmooth, lava
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Archs: x64

Package: XML
Version: 3.99-0.16.1
Version: 3.99-0.17
Depends: R (>= 4.0.0), methods, utils
Suggests: bitops, RCurl
License: BSD_3_clause + file LICENSE
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22 changes: 11 additions & 11 deletions bin/windows/contrib/4.4/PACKAGES
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Expand Up @@ -289,7 +289,7 @@ License: GPL (>= 2)
Archs: x64

Package: cli
Version: 3.6.2
Version: 3.6.3
Depends: R (>= 3.4)
Imports: utils
Suggests: callr, covr, crayon, digest, glue (>= 1.6.0), grDevices,
Expand Down Expand Up @@ -391,7 +391,7 @@ Suggests: bench, brio, callr, cli, covr, decor, desc, ggplot2, glue,
License: MIT + file LICENSE

Package: crayon
Version: 1.5.2
Version: 1.5.3
Imports: grDevices, methods, utils
Suggests: mockery, rstudioapi, testthat, withr
License: MIT + file LICENSE
Expand Down Expand Up @@ -494,7 +494,7 @@ Imports: stats, graphics
License: GPL (>= 2)

Package: digest
Version: 0.6.35
Version: 0.6.36
Depends: R (>= 3.3.0)
Imports: utils
Suggests: tinytest, simplermarkdown
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Archs: x64

Package: MASS
Version: 7.3-60.2
Version: 7.3-61
Priority: recommended
Depends: R (>= 4.4.0), grDevices, graphics, stats, utils
Imports: methods
Expand Down Expand Up @@ -1531,11 +1531,11 @@ License: GPL (>= 3)
Archs: x64

Package: nlme
Version: 3.1-164
Version: 3.1-165
Priority: recommended
Depends: R (>= 3.5.0)
Depends: R (>= 3.6.0)
Imports: graphics, stats, utils, lattice
Suggests: Hmisc, MASS, SASmixed
Suggests: MASS, SASmixed
License: GPL (>= 2)
Archs: x64

Expand Down Expand Up @@ -1707,7 +1707,7 @@ License: MIT + file LICENSE
Archs: x64

Package: prodlim
Version: 2023.08.28
Version: 2024.06.25
Depends: R (>= 2.9.0)
Imports: Rcpp (>= 0.11.5), stats, data.table, grDevices, graphics,
diagram, survival, KernSmooth, lava
Expand Down Expand Up @@ -2377,7 +2377,7 @@ Suggests: HDF5Array (>= 1.7.5), annotate, AnnotationDbi, hgu95av2.db,
License: Artistic-2.0

Package: survival
Version: 3.6-4
Version: 3.7-0
Priority: recommended
Depends: R (>= 3.5.0)
Imports: graphics, Matrix, methods, splines, stats, utils
Expand Down Expand Up @@ -2654,10 +2654,10 @@ License: GPL (>= 2) + file LICENSE
Archs: x64

Package: xfun
Version: 0.44
Version: 0.45
Imports: grDevices, stats, tools
Suggests: testit, parallel, codetools, methods, rstudioapi, tinytex (>=
0.30), mime, markdown (>= 1.5), knitr (>= 1.42), htmltools,
0.30), mime, markdown (>= 1.5), knitr (>= 1.47), htmltools,
remotes, pak, rhub, renv, curl, xml2, jsonlite, magick, yaml,
qs, rmarkdown
License: MIT + file LICENSE
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12 changes: 6 additions & 6 deletions patRoonDeps-4.3.tsv
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Expand Up @@ -34,7 +34,7 @@ circlize 0.4.16
Ckmeans.1d.dp 4.3.5
class 7.3-22
classInt 0.4-10
cli 3.6.2
cli 3.6.3
clipr 0.8.0
cliqueMS 1.7.1 cb569e0b78ce0fa4254f1393874762bed08fa855
clock 0.7.0
Expand All @@ -46,7 +46,7 @@ combinat 0.0-8
commonmark 1.9.1
conflicted 1.2.0
cpp11 0.4.7
crayon 1.5.2
crayon 1.5.3
crosstalk 1.2.1
curl 5.2.1
data.table 1.15.4
Expand All @@ -58,7 +58,7 @@ DelayedArray 0.28.0
dendextend 1.17.1
DEoptimR 1.1-3
diagram 1.6.5
digest 0.6.35
digest 0.6.36
docopt 0.7.1
doParallel 1.0.17
dplyr 1.1.4
Expand Down Expand Up @@ -191,7 +191,7 @@ nontargetData 1.1 75b2a92cd549f72cc71dfe7b86bd42947d62f2c4
numDeriv 2016.8-1.1
openssl 2.2.0
parallelly 1.37.1
patRoon 2.3.1 02e71665cb9c53ef1e89a17f26560d45ae5419d8
patRoon 2.3.1 f0f8aa2b888eea31ee89226b98e17ce9af81e707
pcaMethods 1.94.0
permute 0.9-7
pillar 1.9.0
Expand All @@ -205,7 +205,7 @@ preprocessCore 1.64.0
prettyunits 1.2.0
pROC 1.18.5
processx 3.8.4
prodlim 2023.08.28
prodlim 2024.06.25
progress 1.2.3
progressr 0.14.0
promises 1.3.0
Expand Down Expand Up @@ -320,7 +320,7 @@ withr 3.0.0
xcms 4.0.2
xfun 0.45
xgboost 1.7.7.1
XML 3.99-0.16.1
XML 3.99-0.17
xml2 1.3.6
xtable 1.8-4
XVector 0.42.0
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18 changes: 9 additions & 9 deletions patRoonDeps-4.4.tsv
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Expand Up @@ -34,7 +34,7 @@ circlize 0.4.16
Ckmeans.1d.dp 4.3.5
class 7.3-22
classInt 0.4-10
cli 3.6.2
cli 3.6.3
clipr 0.8.0
cliqueMS 1.7.1 cb569e0b78ce0fa4254f1393874762bed08fa855
clock 0.7.0
Expand All @@ -46,7 +46,7 @@ combinat 0.0-8
commonmark 1.9.1
conflicted 1.2.0
cpp11 0.4.7
crayon 1.5.2
crayon 1.5.3
crosstalk 1.2.1
curl 5.2.1
data.table 1.15.4
Expand All @@ -57,7 +57,7 @@ dbscan 1.1-12
DelayedArray 0.30.1
dendextend 1.17.1
diagram 1.6.5
digest 0.6.35
digest 0.6.36
docopt 0.7.1
doParallel 1.0.17
dplyr 1.1.4
Expand Down Expand Up @@ -156,7 +156,7 @@ lubridate 1.9.3
magick 2.8.3
magrittr 2.0.3
MALDIquant 1.22.2
MASS 7.3-60.2
MASS 7.3-61
MassSpecWavelet 1.70.0
Matrix 1.7-0
MatrixGenerics 1.16.0
Expand All @@ -182,14 +182,14 @@ munsell 0.5.1
mzID 1.42.0
mzR 2.38.0
ncdf4 1.22
nlme 3.1-164
nlme 3.1-165
nnet 7.3-19
nontarget 2.2 e30221585182bc66e1f8e1113b2c1103a0f2cb56
nontargetData 1.1 75b2a92cd549f72cc71dfe7b86bd42947d62f2c4
numDeriv 2016.8-1.1
openssl 2.2.0
parallelly 1.37.1
patRoon 2.3.1 02e71665cb9c53ef1e89a17f26560d45ae5419d8
patRoon 2.3.1 f0f8aa2b888eea31ee89226b98e17ce9af81e707
pcaMethods 1.96.0
permute 0.9-7
pillar 1.9.0
Expand All @@ -203,7 +203,7 @@ preprocessCore 1.66.0
prettyunits 1.2.0
pROC 1.18.5
processx 3.8.4
prodlim 2023.08.28
prodlim 2024.06.25
progress 1.2.3
progressr 0.14.0
promises 1.3.0
Expand Down Expand Up @@ -285,7 +285,7 @@ stringi 1.8.4
stringr 1.5.1
styler 1.10.3
SummarizedExperiment 1.34.0
survival 3.6-4
survival 3.7-0
svglite 2.1.3
sys 3.4.2
systemfonts 1.1.0
Expand Down Expand Up @@ -315,7 +315,7 @@ webchem 1.3.0
webshot 0.5.5
withr 3.0.0
xcms 4.2.2
xfun 0.44
xfun 0.45
xgboost 1.7.7.1
XML 3.99-0.16.1
xml2 1.3.6
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