Update Neuropixels default configs

open-ephys · Oct 11, 2024 · b2ec7fb · b2ec7fb
1 parent 470d958
commit b2ec7fb
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Showing 7 changed files with 478 additions and 275 deletions.
diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -14,6 +14,7 @@ list(GET VERSION_LIST 0 version_major)
 list(GET VERSION_LIST 1 version_minor)
 list(GET VERSION_LIST 2 version_patch)
 
+
 math(EXPR hex "(${version_major} << 16) + (${version_minor} << 8) + ${version_patch}" OUTPUT_FORMAT HEXADECIMAL)
 set(GUI_VERSION_HEX "${hex}")
 

diff --git a/Resources/Configs/acq_board_config.xml b/Resources/Configs/acq_board_config.xml
@@ -2,7 +2,7 @@
 
 <SETTINGS>
   <INFO>
-    <VERSION>1.0.0-dev</VERSION>
+    <VERSION>1.0.0</VERSION>
     <PLUGIN_API_VERSION>9</PLUGIN_API_VERSION>
     <DATE>unknown</DATE>
     <OS>Windows, Linux, or macOS</OS>
@@ -11,10 +11,10 @@
   </INFO>
   <SIGNALCHAIN>
     <PROCESSOR name="Acquisition Board" insertionPoint="0" pluginName="Acquisition Board"
-               type="4" index="0" libraryName="Rhythm Plugins" libraryVersion=""
+               type="4" index="0" libraryName="Acquisition Board" libraryVersion=""
                processorType="2" nodeId="100">
       <PROCESSOR_PARAMETERS/>
-      <STREAM name="Rhythm Data" description="Continuous and event data from a device running Rhythm FPGA firmware"
+      <STREAM name="acquisition_board" description="Continuous and event data from a device running Rhythm FPGA firmware"
               sample_rate="30000.0" channel_count="72">
         <PARAMETERS/>
       </STREAM>

diff --git a/Resources/Configs/file_reader_config.xml b/Resources/Configs/file_reader_config.xml
@@ -2,7 +2,7 @@
 
 <SETTINGS>
   <INFO>
-    <VERSION>1.0.0-dev</VERSION>
+    <VERSION>1.0.0</VERSION>
     <PLUGIN_API_VERSION>9</PLUGIN_API_VERSION>
     <DATE>unknown</DATE>
     <OS>Windows, Linux, or macOS</OS>

diff --git a/Resources/Configs/neuropixels_pxi_config.xml b/Resources/Configs/neuropixels_pxi_config.xml
@@ -2,7 +2,7 @@
 
 <SETTINGS>
   <INFO>
-    <VERSION>0.7.0</VERSION>
+    <VERSION>1.0.0</VERSION>
     <PLUGIN_API_VERSION>9</PLUGIN_API_VERSION>
     <DATE>unknown</DATE>
     <OS>Windows</OS>
@@ -298,6 +298,68 @@
         </CUSTOM_PARAMETERS>
       </EDITOR>
     </PROCESSOR>
+    <PROCESSOR name="Bandpass Filter" insertionPoint="1" pluginName="Bandpass Filter"
+               type="1" index="1" libraryName="Bandpass Filter" libraryVersion="1.0.0-dev"
+               processorType="1" nodeId="103">
+      <PROCESSOR_PARAMETERS threads="1"/>
+      <STREAM name="ProbeA-AP" description="description" sample_rate="30000.0"
+              channel_count="384" device_name="Neuropixels 1.0">
+        <PARAMETERS enable_stream="1" low_cut="100.0" high_cut="5000.0" channels=""/>
+      </STREAM>
+      <STREAM name="ProbeA-LFP" description="description" sample_rate="30000.0"
+              channel_count="384" device_name="Neuropixels 1.0">
+        <PARAMETERS enable_stream="1" low_cut="100.0" high_cut="5000.0" channels=""/>
+      </STREAM>
+      <CUSTOM_PARAMETERS/>
+      <EDITOR isCollapsed="0" isDrawerOpen="0" displayName="Bandpass Filter"
+              activeStream="0"/>
+    </PROCESSOR>
+    <PROCESSOR name="Neuropixels CAR" insertionPoint="1" pluginName="Neuropixels CAR"
+               type="1" index="5" libraryName="Neuropixels CAR" libraryVersion="0.1.0"
+               processorType="1" nodeId="104">
+      <PROCESSOR_PARAMETERS/>
+      <STREAM name="ProbeA-AP" description="description" sample_rate="30000.0"
+              channel_count="384" device_name="Neuropixels 1.0">
+        <PARAMETERS enable_stream="1" Channels=""/>
+      </STREAM>
+      <STREAM name="ProbeA-LFP" description="description" sample_rate="30000.0"
+              channel_count="384" device_name="Neuropixels 1.0">
+        <PARAMETERS enable_stream="1" Channels=""/>
+      </STREAM>
+      <CUSTOM_PARAMETERS/>
+      <EDITOR isCollapsed="0" isDrawerOpen="0" displayName="Neuropixels CAR"
+              activeStream="0"/>
+    </PROCESSOR>
+    <PROCESSOR name="Probe Viewer" insertionPoint="1" pluginName="Probe Viewer"
+               type="1" index="7" libraryName="Probe Viewer" libraryVersion="0.4.0"
+               processorType="3" nodeId="105">
+      <PROCESSOR_PARAMETERS trigger_line="-1" display_stream="0"/>
+      <STREAM name="ProbeA-AP" description="description" sample_rate="30000.0"
+              channel_count="384" device_name="Neuropixels 1.0">
+        <PARAMETERS enable_stream="1"/>
+      </STREAM>
+      <STREAM name="ProbeA-LFP" description="description" sample_rate="30000.0"
+              channel_count="384" device_name="Neuropixels 1.0">
+        <PARAMETERS enable_stream="1"/>
+      </STREAM>
+      <CUSTOM_PARAMETERS/>
+      <EDITOR isCollapsed="0" isDrawerOpen="0" displayName="Probe Viewer" activeStream="0"
+              Type="Visualizer" tabText="ProbeViewer">
+        <TAB Active="1"/>
+        <WINDOW Active="0"/>
+        <VISUALIZER_PARAMETERS/>
+        <CUSTOM_PARAMETERS>
+          <CANVAS>
+            <STREAM id="10002" zoomLowerBound="394" zoomOffset="0" zoomHeight="50"/>
+            <STREAM id="10003" zoomLowerBound="394" zoomOffset="0" zoomHeight="50"/>
+            <OPTIONS renderMode="1" rmsLow="0.0" rmsHi="100.0" fftLow="-100.0" fftHi="0.0"
+                     fftFreqBin="1" spikeLow="0.0" spikeHi="10000.0" spikeThreshold="-50.0"
+                     colourScheme="1" showAverageView="0" rollingWindowSize="8.0"
+                     averageWindowPre="0.5" averageWindowPost="0.5"/>
+          </CANVAS>
+        </CUSTOM_PARAMETERS>
+      </EDITOR>
+    </PROCESSOR>
   </SIGNALCHAIN>
   <EDITORVIEWPORT scroll="0">
     <NEUROPIX-PXI ID="100"/>
@@ -310,6 +372,7 @@
       <TAB nodeId="1"/>
       <TAB nodeId="100"/>
       <TAB nodeId="102"/>
+      <TAB nodeId="105"/>
     </TABBEDCOMPONENT>
   </DATAVIEWPORT>
   <AUDIO sampleRate="48000.0" bufferSize="1024" deviceType="Windows Audio">

diff --git a/Resources/Configs/oe_acq_board_config.xml b/Resources/Configs/oe_acq_board_config.xml