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@hivdb

Stanford University HIVDB Team

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  1. sierra sierra Public

    HIVDB Genotypic Resistance Interpretation Program

    Java 15 7

  2. codfreq codfreq Public

    FASTQ-to-CodFreq pipeline for HIV-1 and SARS-CoV-2

    Python 11 3

  3. covid-drdb-payload covid-drdb-payload Public

    A relational database of SARS-CoV-2 resistance data.

    7 8

  4. sierra-client sierra-client Public

    HIVdb webservice client

    Python 11 5

  5. clinviro clinviro Public

    An open source Laboratory Information Management System for HIV genotypic resistance test for laboratories

    JavaScript 6 5

  6. nucamino nucamino Public

    A nucleotide to amino acid alignment program optimized for virus gene sequences.

    Go 6 9

Repositories

Showing 10 of 56 repositories
  • hivdb-cms Public

    Static CMS data source for hivdb.stanford.edu

    hivdb/hivdb-cms’s past year of commit activity
    HTML 0 GPL-3.0 0 0 3 Updated Jan 6, 2025
  • sierra Public

    HIVDB Genotypic Resistance Interpretation Program

    hivdb/sierra’s past year of commit activity
    Java 15 GPL-3.0 7 13 0 Updated Jan 6, 2025
  • hivfacts Public

    Structured knowledge base of HIV-1/HIV-2.

    hivdb/hivfacts’s past year of commit activity
    Java 6 Unlicense 1 1 1 Updated Jan 6, 2025
  • Envelope Public

    gp120, gp41 files and code

    hivdb/Envelope’s past year of commit activity
    Python 0 0 0 0 Updated Dec 17, 2024
  • study_metadata Public

    Fetch pub med

    hivdb/study_metadata’s past year of commit activity
    Python 0 0 0 0 Updated Nov 20, 2024
  • chiro-cms Public
    hivdb/chiro-cms’s past year of commit activity
    Python 1 GPL-3.0 0 2 2 Updated Oct 29, 2024
  • chatpaper Public
    hivdb/chatpaper’s past year of commit activity
    HTML 0 0 0 0 Updated Oct 10, 2024
  • sierra-core Public

    Core code of Sierra Project.

    hivdb/sierra-core’s past year of commit activity
    Java 1 GPL-3.0 1 3 1 Updated Sep 21, 2024
  • hivdb/genbank_seq_download’s past year of commit activity
    Python 0 0 0 0 Updated Sep 9, 2024
  • covid-drdb-payload Public

    A relational database of SARS-CoV-2 resistance data.

    hivdb/covid-drdb-payload’s past year of commit activity
    7 CC-BY-SA-4.0 8 121 (2 issues need help) 0 Updated Aug 21, 2024

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