Merge pull request #37 from eXascaleInfolab/naterq_memory

naterq memory
eXascaleInfolab · Nov 22, 2024 · 4ba842f · 4ba842f
2 parents 3e1485b + 058881e
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diff --git a/.coverage b/.coverage
diff --git a/.github/workflows/pytest_loading.yml b/.github/workflows/pytest_loading.yml
@@ -24,6 +24,7 @@ jobs:
         sudo apt-get install libmlpack-dev
         sudo apt-get install libopenblas-dev
         sudo apt-get install python3-dev build-essential
+        pip install --upgrade google protobuf
         pip install -r requirements.txt
         pip install mypy
         pip install pytest
@@ -32,4 +33,5 @@ jobs:
     - name: Run pytest
       run: |
         python -m pytest ./tests/test_loading.py
-        python -m pytest ./tests/test_exception.py
+        python -m pytest ./tests/test_exception.py
+        python -m pytest ./tests/test_benchmarking.py
diff --git a/.idea/workspace.xml b/.idea/workspace.xml
diff --git a/LICENSE.txt b/LICENSE.txt
@@ -0,0 +1,9 @@
+MIT License
+
+Copyright (c) 2019-2024 UNIFR
+
+Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the “Software”), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
diff --git a/README.md b/README.md
@@ -3,12 +3,12 @@
 
 # Welcome to ImputeGAP
 
-ImputeGAP is a comprehensive framework designed for time series imputation algorithms. It offers a streamlined interface that bridges algorithm evaluation and parameter tuning, utilizing datasets from diverse fields such as neuroscience, medicine, and energy. The framework includes advanced imputation algorithms from five different families, supports various patterns of missing data, and provides multiple evaluation metrics. Additionally, ImputeGAP enables AutoML optimization, feature extraction, and feature analysis with SHAP. The framework is built for easy integration of new algorithms, datasets, and evaluation metrics, enhancing its flexibility and adaptability.
+ImputeGAP is a comprehensive framework designed for time series imputation algorithms. It offers a streamlined interface that bridges algorithm evaluation and parameter tuning, utilizing datasets from diverse fields such as neuroscience, medicine, and energy. The framework includes advanced imputation algorithms from five different families, supports various patterns of missing data, and provides multiple evaluation metrics. Additionally, ImputeGAP enables AutoML optimization, feature extraction, and feature analysis. The framework enables easy integration of new algorithms, datasets, and evaluation metrics.
 
 ![Python](https://img.shields.io/badge/Python-v3.12-blue) 
 ![Release](https://img.shields.io/badge/Release-v0.2.2-brightgreen) 
 ![License](https://img.shields.io/badge/License-GPLv3-blue?style=flat&logo=gnu)
-![Coverage](https://img.shields.io/badge/Coverage-93%25-brightgreen)
+![Coverage](https://img.shields.io/badge/Coverage-91%25-brightgreen)
 ![PyPI](https://img.shields.io/pypi/v/imputegap?label=PyPI&color=blue)
 ![Language](https://img.shields.io/badge/Language-English-blue)
 ![Platform](https://img.shields.io/badge/platform-Windows%20%7C%20Linux%20%7C%20MacOS-informational)
@@ -251,9 +251,9 @@ To add your own imputation algorithm in Python or C++, please refer to the detai
 
 ## References
 
-Mourad Khayati, Quentin Nater, and Jacques Pasquier. <b>“ImputeVIS: An Interactive Evaluator to Benchmark Imputation Techniques for Time Series Data.”</b> Proceedings of the VLDB Endowment (PVLDB). Demo Track 17, no. 1 (2024): 4329–32.
+Mourad Khayati, Quentin Nater, and Jacques Pasquier. “ImputeVIS: An Interactive Evaluator to Benchmark Imputation Techniques for Time Series Data.” Proceedings of the VLDB Endowment (PVLDB). Demo Track 17, no. 1 (2024): 4329–32.
 
-Mourad Khayati, Alberto Lerner, Zakhar Tymchenko, and Philippe Cudre-Mauroux. <b>“Mind the Gap: An Experimental Evaluation of Imputation of Missing Values Techniques in Time Series.”</b> In Proceedings of the VLDB Endowment (PVLDB), Vol. 13, 2020.
+Mourad Khayati, Alberto Lerner, Zakhar Tymchenko, and Philippe Cudre-Mauroux. “Mind the Gap: An Experimental Evaluation of Imputation of Missing Values Techniques in Time Series.” In Proceedings of the VLDB Endowment (PVLDB), Vol. 13, 2020.
 
 
 ---

diff --git a/assets/TimeSeriesData_plot.jpg b/assets/TimeSeriesData_plot.jpg
diff --git a/assets/test_plot.jpg b/assets/test_plot.jpg
diff --git a/build/lib/imputegap/__init__.py b/build/lib/imputegap/__init__.py
@@ -1 +1 @@
-__version__ = "0.2.2"
+__version__ = "1.0.1"
diff --git a/docs/generation/source/conf.py b/docs/generation/source/conf.py
@@ -33,8 +33,8 @@
 html_css_files = ['custom.css']
 
 # Set the version and release info
-version = '0.2.2'
-release = '0.2.2'
+version = '1.0.1'
+release = '1.0.1'
 
 
 # You can also add links to edit the documentation on GitHub

diff --git a/imputegap.egg-info/PKG-INFO b/imputegap.egg-info/PKG-INFO
@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: imputegap
-Version: 0.2.2
+Version: 1.0.1
 Summary: A Library of Imputation Techniques for Time Series Data
 Home-page: https://github.com/eXascaleInfolab/ImputeGAP
 Author: Quentin Nater

diff --git a/imputegap/__init__.py b/imputegap/__init__.py
@@ -1 +1 @@
-__version__ = "0.2.2"
+__version__ = "1.0.1"
diff --git a/imputegap/__pycache__/__init__.cpython-312.pyc b/imputegap/__pycache__/__init__.cpython-312.pyc
diff --git a/imputegap/assets/shap/chlorine_cdrec_DTL_Beeswarm.png b/imputegap/assets/shap/chlorine_cdrec_DTL_Beeswarm.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_DTL_Waterfall.png b/imputegap/assets/shap/chlorine_cdrec_DTL_Waterfall.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_results.txt b/imputegap/assets/shap/chlorine_cdrec_results.txt
@@ -1,22 +1,22 @@
-Feature : 6     cdrec      with a score of 58.98      Geometry           Proportion of high incremental changes in the series              MD_hrv_classic_pnn40
-Feature : 5     cdrec      with a score of 9.1        Correlation        Time reversibility                                                CO_trev_1_num
-Feature : 2     cdrec      with a score of 6.02       Correlation        First 1/e crossing of the ACF                                     CO_f1ecac
-Feature : 1     cdrec      with a score of 4.52       Geometry           10-bin histogram mode                                             DN_HistogramMode_10
-Feature : 10    cdrec      with a score of 4.42       Geometry           Goodness of exponential fit to embedding distance distribution    CO_Embed2_Dist_tau_d_expfit_meandiff
-Feature : 15    cdrec      with a score of 4.1        Transformation     Power in the lowest 20% of frequencies                            SP_Summaries_welch_rect_area_5_1
-Feature : 21    cdrec      with a score of 3.56       Trend              Error of 3-point rolling mean forecast                            FC_LocalSimple_mean3_stderr
-Feature : 12    cdrec      with a score of 3.44       Correlation        Change in autocorrelation timescale after incremental differencing FC_LocalSimple_mean1_tauresrat
-Feature : 0     cdrec      with a score of 2.64       Geometry           5-bin histogram mode                                              DN_HistogramMode_5
-Feature : 17    cdrec      with a score of 1.41       Trend              Entropy of successive pairs in symbolized series                  SB_MotifThree_quantile_hh
-Feature : 4     cdrec      with a score of 0.86       Correlation        Histogram-based automutual information (lag 2, 5 bins)            CO_HistogramAMI_even_2_5
-Feature : 8     cdrec      with a score of 0.48       Geometry           Transition matrix column variance                                 SB_TransitionMatrix_3ac_sumdiagcov
-Feature : 13    cdrec      with a score of 0.46       Geometry           Positive outlier timing                                           DN_OutlierInclude_p_001_mdrmd
-Feature : 14    cdrec      with a score of 0.01       Geometry           Negative outlier timing                                           DN_OutlierInclude_n_001_mdrmd
-Feature : 3     cdrec      with a score of 0.0        Correlation        First minimum of the ACF                                          CO_FirstMin_ac
+Feature : 1     cdrec      with a score of 90.54      Geometry           10-bin histogram mode                                             DN_HistogramMode_10
+Feature : 12    cdrec      with a score of 3.99       Correlation        Change in autocorrelation timescale after incremental differencing FC_LocalSimple_mean1_tauresrat
+Feature : 5     cdrec      with a score of 3.83       Correlation        Time reversibility                                                CO_trev_1_num
+Feature : 18    cdrec      with a score of 0.57       Geometry           Rescaled range fluctuation analysis (low-scale scaling)           SC_FluctAnal_2_rsrangefit_50_1_logi_prop_r1
+Feature : 13    cdrec      with a score of 0.37       Geometry           Positive outlier timing                                           DN_OutlierInclude_p_001_mdrmd
+Feature : 3     cdrec      with a score of 0.33       Correlation        First minimum of the ACF                                          CO_FirstMin_ac
+Feature : 14    cdrec      with a score of 0.29       Geometry           Negative outlier timing                                           DN_OutlierInclude_n_001_mdrmd
+Feature : 6     cdrec      with a score of 0.09       Geometry           Proportion of high incremental changes in the series              MD_hrv_classic_pnn40
+Feature : 0     cdrec      with a score of 0.0        Geometry           5-bin histogram mode                                              DN_HistogramMode_5
+Feature : 2     cdrec      with a score of 0.0        Correlation        First 1/e crossing of the ACF                                     CO_f1ecac
+Feature : 4     cdrec      with a score of 0.0        Correlation        Histogram-based automutual information (lag 2, 5 bins)            CO_HistogramAMI_even_2_5
 Feature : 7     cdrec      with a score of 0.0        Geometry           Longest stretch of above-mean values                              SB_BinaryStats_mean_longstretch1
+Feature : 8     cdrec      with a score of 0.0        Geometry           Transition matrix column variance                                 SB_TransitionMatrix_3ac_sumdiagcov
 Feature : 9     cdrec      with a score of 0.0        Trend              Wangs periodicity metric                                          PD_PeriodicityWang_th0_01
+Feature : 10    cdrec      with a score of 0.0        Geometry           Goodness of exponential fit to embedding distance distribution    CO_Embed2_Dist_tau_d_expfit_meandiff
 Feature : 11    cdrec      with a score of 0.0        Correlation        First minimum of the AMI function                                 IN_AutoMutualInfoStats_40_gaussian_fmmi
+Feature : 15    cdrec      with a score of 0.0        Transformation     Power in the lowest 20% of frequencies                            SP_Summaries_welch_rect_area_5_1
 Feature : 16    cdrec      with a score of 0.0        Geometry           Longest stretch of decreasing values                              SB_BinaryStats_diff_longstretch0
-Feature : 18    cdrec      with a score of 0.0        Geometry           Rescaled range fluctuation analysis (low-scale scaling)           SC_FluctAnal_2_rsrangefit_50_1_logi_prop_r1
+Feature : 17    cdrec      with a score of 0.0        Trend              Entropy of successive pairs in symbolized series                  SB_MotifThree_quantile_hh
 Feature : 19    cdrec      with a score of 0.0        Geometry           Detrended fluctuation analysis (low-scale scaling)                SC_FluctAnal_2_dfa_50_1_2_logi_prop_r1
 Feature : 20    cdrec      with a score of 0.0        Transformation     Centroid frequency                                                SP_Summaries_welch_rect_centroid
+Feature : 21    cdrec      with a score of 0.0        Trend              Error of 3-point rolling mean forecast                            FC_LocalSimple_mean3_stderr
diff --git a/imputegap/assets/shap/chlorine_cdrec_shap_aggregate_plot.png b/imputegap/assets/shap/chlorine_cdrec_shap_aggregate_plot.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_shap_aggregate_reverse_plot.png b/imputegap/assets/shap/chlorine_cdrec_shap_aggregate_reverse_plot.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_shap_correlation_plot.png b/imputegap/assets/shap/chlorine_cdrec_shap_correlation_plot.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_shap_geometry_plot.png b/imputegap/assets/shap/chlorine_cdrec_shap_geometry_plot.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_shap_plot.png b/imputegap/assets/shap/chlorine_cdrec_shap_plot.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_shap_reverse_plot.png b/imputegap/assets/shap/chlorine_cdrec_shap_reverse_plot.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_shap_transformation_plot.png b/imputegap/assets/shap/chlorine_cdrec_shap_transformation_plot.png
diff --git a/imputegap/assets/shap/chlorine_cdrec_shap_trend_plot.png b/imputegap/assets/shap/chlorine_cdrec_shap_trend_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_DTL_Beeswarm.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_DTL_Beeswarm.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_DTL_Waterfall.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_DTL_Waterfall.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_results.txt b/imputegap/assets/shap/fmri-objectviewing_cdrec_results.txt
@@ -0,0 +1,22 @@
+Feature : 1     cdrec      with a score of 33.18      Geometry           10-bin histogram mode                                             DN_HistogramMode_10
+Feature : 0     cdrec      with a score of 31.45      Geometry           5-bin histogram mode                                              DN_HistogramMode_5
+Feature : 6     cdrec      with a score of 8.37       Geometry           Proportion of high incremental changes in the series              MD_hrv_classic_pnn40
+Feature : 5     cdrec      with a score of 7.89       Correlation        Time reversibility                                                CO_trev_1_num
+Feature : 2     cdrec      with a score of 4.04       Correlation        First 1/e crossing of the ACF                                     CO_f1ecac
+Feature : 21    cdrec      with a score of 3.72       Trend              Error of 3-point rolling mean forecast                            FC_LocalSimple_mean3_stderr
+Feature : 13    cdrec      with a score of 2.65       Geometry           Positive outlier timing                                           DN_OutlierInclude_p_001_mdrmd
+Feature : 17    cdrec      with a score of 2.16       Trend              Entropy of successive pairs in symbolized series                  SB_MotifThree_quantile_hh
+Feature : 15    cdrec      with a score of 2.02       Transformation     Power in the lowest 20% of frequencies                            SP_Summaries_welch_rect_area_5_1
+Feature : 4     cdrec      with a score of 1.76       Correlation        Histogram-based automutual information (lag 2, 5 bins)            CO_HistogramAMI_even_2_5
+Feature : 10    cdrec      with a score of 1.32       Geometry           Goodness of exponential fit to embedding distance distribution    CO_Embed2_Dist_tau_d_expfit_meandiff
+Feature : 12    cdrec      with a score of 0.76       Correlation        Change in autocorrelation timescale after incremental differencing FC_LocalSimple_mean1_tauresrat
+Feature : 14    cdrec      with a score of 0.36       Geometry           Negative outlier timing                                           DN_OutlierInclude_n_001_mdrmd
+Feature : 8     cdrec      with a score of 0.33       Geometry           Transition matrix column variance                                 SB_TransitionMatrix_3ac_sumdiagcov
+Feature : 3     cdrec      with a score of 0.0        Correlation        First minimum of the ACF                                          CO_FirstMin_ac
+Feature : 7     cdrec      with a score of 0.0        Geometry           Longest stretch of above-mean values                              SB_BinaryStats_mean_longstretch1
+Feature : 9     cdrec      with a score of 0.0        Trend              Wangs periodicity metric                                          PD_PeriodicityWang_th0_01
+Feature : 11    cdrec      with a score of 0.0        Correlation        First minimum of the AMI function                                 IN_AutoMutualInfoStats_40_gaussian_fmmi
+Feature : 16    cdrec      with a score of 0.0        Geometry           Longest stretch of decreasing values                              SB_BinaryStats_diff_longstretch0
+Feature : 18    cdrec      with a score of 0.0        Geometry           Rescaled range fluctuation analysis (low-scale scaling)           SC_FluctAnal_2_rsrangefit_50_1_logi_prop_r1
+Feature : 19    cdrec      with a score of 0.0        Geometry           Detrended fluctuation analysis (low-scale scaling)                SC_FluctAnal_2_dfa_50_1_2_logi_prop_r1
+Feature : 20    cdrec      with a score of 0.0        Transformation     Centroid frequency                                                SP_Summaries_welch_rect_centroid
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_aggregate_plot.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_aggregate_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_aggregate_reverse_plot.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_aggregate_reverse_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_correlation_plot.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_correlation_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_geometry_plot.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_geometry_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_plot.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_reverse_plot.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_reverse_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_transformation_plot.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_transformation_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_trend_plot.png b/imputegap/assets/shap/fmri-objectviewing_cdrec_shap_trend_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_DTL_Beeswarm.png b/imputegap/assets/shap/fmri-objectviewing_iim_DTL_Beeswarm.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_DTL_Waterfall.png b/imputegap/assets/shap/fmri-objectviewing_iim_DTL_Waterfall.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_results.txt b/imputegap/assets/shap/fmri-objectviewing_iim_results.txt
@@ -0,0 +1,22 @@
+Feature : 0     iim        with a score of 34.56      Geometry           5-bin histogram mode                                              DN_HistogramMode_5
+Feature : 1     iim        with a score of 25.08      Geometry           10-bin histogram mode                                             DN_HistogramMode_10
+Feature : 4     iim        with a score of 14.99      Correlation        Histogram-based automutual information (lag 2, 5 bins)            CO_HistogramAMI_even_2_5
+Feature : 15    iim        with a score of 7.09       Transformation     Power in the lowest 20% of frequencies                            SP_Summaries_welch_rect_area_5_1
+Feature : 21    iim        with a score of 6.78       Trend              Error of 3-point rolling mean forecast                            FC_LocalSimple_mean3_stderr
+Feature : 5     iim        with a score of 6.36       Correlation        Time reversibility                                                CO_trev_1_num
+Feature : 6     iim        with a score of 1.45       Geometry           Proportion of high incremental changes in the series              MD_hrv_classic_pnn40
+Feature : 14    iim        with a score of 0.94       Geometry           Negative outlier timing                                           DN_OutlierInclude_n_001_mdrmd
+Feature : 10    iim        with a score of 0.9        Geometry           Goodness of exponential fit to embedding distance distribution    CO_Embed2_Dist_tau_d_expfit_meandiff
+Feature : 17    iim        with a score of 0.73       Trend              Entropy of successive pairs in symbolized series                  SB_MotifThree_quantile_hh
+Feature : 2     iim        with a score of 0.66       Correlation        First 1/e crossing of the ACF                                     CO_f1ecac
+Feature : 8     iim        with a score of 0.23       Geometry           Transition matrix column variance                                 SB_TransitionMatrix_3ac_sumdiagcov
+Feature : 12    iim        with a score of 0.2        Correlation        Change in autocorrelation timescale after incremental differencing FC_LocalSimple_mean1_tauresrat
+Feature : 13    iim        with a score of 0.03       Geometry           Positive outlier timing                                           DN_OutlierInclude_p_001_mdrmd
+Feature : 3     iim        with a score of 0.0        Correlation        First minimum of the ACF                                          CO_FirstMin_ac
+Feature : 7     iim        with a score of 0.0        Geometry           Longest stretch of above-mean values                              SB_BinaryStats_mean_longstretch1
+Feature : 9     iim        with a score of 0.0        Trend              Wangs periodicity metric                                          PD_PeriodicityWang_th0_01
+Feature : 11    iim        with a score of 0.0        Correlation        First minimum of the AMI function                                 IN_AutoMutualInfoStats_40_gaussian_fmmi
+Feature : 16    iim        with a score of 0.0        Geometry           Longest stretch of decreasing values                              SB_BinaryStats_diff_longstretch0
+Feature : 18    iim        with a score of 0.0        Geometry           Rescaled range fluctuation analysis (low-scale scaling)           SC_FluctAnal_2_rsrangefit_50_1_logi_prop_r1
+Feature : 19    iim        with a score of 0.0        Geometry           Detrended fluctuation analysis (low-scale scaling)                SC_FluctAnal_2_dfa_50_1_2_logi_prop_r1
+Feature : 20    iim        with a score of 0.0        Transformation     Centroid frequency                                                SP_Summaries_welch_rect_centroid
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_shap_aggregate_plot.png b/imputegap/assets/shap/fmri-objectviewing_iim_shap_aggregate_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_shap_aggregate_reverse_plot.png b/imputegap/assets/shap/fmri-objectviewing_iim_shap_aggregate_reverse_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_shap_correlation_plot.png b/imputegap/assets/shap/fmri-objectviewing_iim_shap_correlation_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_shap_geometry_plot.png b/imputegap/assets/shap/fmri-objectviewing_iim_shap_geometry_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_shap_plot.png b/imputegap/assets/shap/fmri-objectviewing_iim_shap_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_shap_reverse_plot.png b/imputegap/assets/shap/fmri-objectviewing_iim_shap_reverse_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_shap_transformation_plot.png b/imputegap/assets/shap/fmri-objectviewing_iim_shap_transformation_plot.png
diff --git a/imputegap/assets/shap/fmri-objectviewing_iim_shap_trend_plot.png b/imputegap/assets/shap/fmri-objectviewing_iim_shap_trend_plot.png
diff --git a/imputegap/imputegap/assets/rawdata_plot.jpg b/imputegap/imputegap/assets/rawdata_plot.jpg
diff --git a/imputegap/recovery/__pycache__/benchmarking.cpython-312.pyc b/imputegap/recovery/__pycache__/benchmarking.cpython-312.pyc
diff --git a/imputegap/recovery/__pycache__/explainer.cpython-312.pyc b/imputegap/recovery/__pycache__/explainer.cpython-312.pyc
diff --git a/imputegap/recovery/__pycache__/manager.cpython-312.pyc b/imputegap/recovery/__pycache__/manager.cpython-312.pyc