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Included the following changes based on pr discussions:
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- Added the copyright sign
- Provided a link to the CU Innovations page
- Provided a link to guide license generation in a repo
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Cameron Mattson committed Feb 7, 2025
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Expand Up @@ -59,9 +59,10 @@ We use software libraries in these analyses, and we save specific versions in co
We also must specify the license, present a clear README with reproducibility/usage instructions, a brief summary of the results, and citation instructions.
We suggest following the flowchart below to choose a license when creating a repository:
![Process for choosing a repository license.](images/selecting_a_license.png)
According to the CU Innovations office when creating or modifying a license you must include the following line (with the appropriate year):
`Copyright <year> the Regents of the University of Colorado`
For further questions about licensing requirements contact the CU Innovations Office.
According to the [CU Innovations office](https://www.cuanschutz.edu/cu-innovations) when creating or modifying a license you must include the following line (with the appropriate year):
`Copyright (c) <year> the Regents of the University of Colorado`
For further questions about licensing requirements contact the [CU Innovations Office](https://www.cuanschutz.edu/cu-innovations).
To generate a license from a template in github follow [this github docs guide](https://docs.github.com/en/communities/setting-up-your-project-for-healthy-contributions/adding-a-license-to-a-repository)

Analysis repositories must be included in our publications, and we consider them to be the ground truth methods section. The analyses must be fully reproducible (we aim for [Gold Reproducibility](https://www.nature.com/articles/s41592-021-01256-7#Sec4)) and open source.
For each submission and subsequent resubmission, we generate specific “github releases”.
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