Fix structural padding issue

.github/workflows/ci.yml

@@ -44,23 +44,24 @@ jobs:
         shell: julia --color=yes --project=. {0}
         run: |
           using Pkg
-          Pkg.add(PackageSpec(path=pwd(), subdir="MRIBase"))
-          Pkg.add(PackageSpec(path=pwd(), subdir="MRIFiles"))
-          Pkg.add(PackageSpec(path=pwd(), subdir="MRISampling"))
-          Pkg.add(PackageSpec(path=pwd(), subdir="MRISimulation"))
-          Pkg.add(PackageSpec(path=pwd(), subdir="MRIOperators"))
-          Pkg.add(PackageSpec(path=pwd(), subdir="MRICoilSensitivities"))
+          Pkg.develop(PackageSpec(path=pwd(), subdir="MRIBase"))
+          Pkg.develop(PackageSpec(path=pwd(), subdir="MRIFiles"))
+          Pkg.develop(PackageSpec(path=pwd(), subdir="MRISampling"))
+          Pkg.develop(PackageSpec(path=pwd(), subdir="MRISimulation"))
+          Pkg.develop(PackageSpec(path=pwd(), subdir="MRIOperators"))
+          Pkg.develop(PackageSpec(path=pwd(), subdir="MRICoilSensitivities"))
       - uses: julia-actions/julia-buildpkg@v1
       - uses: julia-actions/julia-runtest@v1
       - name: Run subpackage tests
-        shell: bash
+        shell: julia --color=yes --project=. {0}
         run: |
-          julia --project="MRIBase" -e "using Pkg; Pkg.develop(PackageSpec(path=\".\")); Pkg.update(); Pkg.test()"
-          julia --project="MRIFiles" -e "using Pkg; Pkg.develop(PackageSpec(path=\".\")); Pkg.update(); Pkg.test()"
-          julia --project="MRISampling" -e "using Pkg; Pkg.develop(PackageSpec(path=\".\")); Pkg.update(); Pkg.test()"
-          julia --project="MRISimulation" -e "using Pkg; Pkg.develop(PackageSpec(path=\".\")); Pkg.update(); Pkg.test()"
-          julia --project="MRIOperators" -e "using Pkg; Pkg.develop(PackageSpec(path=\".\")); Pkg.update(); Pkg.test()"
-          julia --project="MRICoilSensitivities" -e "using Pkg; Pkg.develop(PackageSpec(path=\".\")); Pkg.update(); Pkg.test()"
+          using Pkg
+          Pkg.test("MRIBase")
+          Pkg.test("MRIFiles")
+          Pkg.test("MRISampling")
+          Pkg.test("MRISimulation")
+          Pkg.test("MRIOperators")
+          Pkg.test("MRICoilSensitivities")
       - uses: julia-actions/julia-processcoverage@v1
       - uses: codecov/codecov-action@v3
         with:

MRIBase/Project.toml

@@ -1,7 +1,7 @@
 name = "MRIBase"
 uuid = "f7771a9a-6e57-4e71-863b-6e4b6a2f17df"
 author = ["Tobias Knopp <[email protected]>"]
-version = "0.4.1"
+version = "0.4.2"
 
 [deps]
 AbstractNFFTs = "7f219486-4aa7-41d6-80a7-e08ef20ceed7"

MRIBase/src/Datatypes/RawAcqData.jl

@@ -1,4 +1,6 @@
 export RawAcquisitionData, EncodingCounters, AcquisitionHeader, Profile, minimalHeader, profileIdx
+export Limit, MeasurementDependency, CoilDescription
+
 
 """
 Encoding counters used in each Profile of a RawAcquisitionData object.
@@ -409,6 +411,25 @@ function minimalHeader(encodingSize, fov::NTuple{3,AbstractFloat};
   return params
 end
 
+# The following three structs will be contained in the parameter dictionary when reading a full
+# ISMRMRD file
+
+struct Limit
+  minimum::Int
+  maximum::Int
+  center::Int
+end
+
+struct MeasurementDependency
+  dependencyType::String
+  measurementID::String
+end
+
+struct CoilDescription
+  number::Int
+  name::String
+end
+
 function profileIdx(acqData::AcquisitionData, contr::Int)
   tr = trajectory(acqData, contr)
   numSamp = numSamplingPerProfile(tr)

MRIFiles/Project.toml

@@ -1,7 +1,7 @@
 name = "MRIFiles"
 uuid = "5a6f062f-bf45-497d-b654-ad17aae2a530"
 author = ["Tobias Knopp <[email protected]>"]
-version = "0.2.1"
+version = "0.3"
 
 [deps]
 Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
@@ -14,7 +14,7 @@ Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
 
 [compat]
 julia = "1.6"
-MRIBase = "0.3, 0.4"
+MRIBase = "0.4.2"
 FileIO = "1.2"
 HDF5 = "0.16, 0.17"
 LightXML = "0.9"