Skip to content
@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

Pinned Loading

  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 351 151

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 23 14

Repositories

Showing 10 of 409 repositories
  • deep-neurographs Public

    A Python package that utilizes machine learning to correct split mistakes in a fragmented neuron segmentation.

    AllenInstitute/deep-neurographs’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Jan 24, 2025
  • mtrain_regimens Public

    Repository to track training stages and regimens for visual behavior

    AllenInstitute/mtrain_regimens’s past year of commit activity
    Python 3 4 14 0 Updated Jan 24, 2025
  • openscope_mousemotion Public Forked from YayaWeizz/RDK

    Moving dot stimuli for the OpenScope MouseMotion project

    AllenInstitute/openscope_mousemotion’s past year of commit activity
    Python 0 GPL-3.0 1 0 0 Updated Jan 24, 2025
  • scrattch.taxonomy Public

    Allen Institute Taxonomy building R package

    AllenInstitute/scrattch.taxonomy’s past year of commit activity
    HTML 1 1 10 0 Updated Jan 24, 2025
  • scrattch.patchseq Public
    AllenInstitute/scrattch.patchseq’s past year of commit activity
    R 0 1 0 1 Updated Jan 24, 2025
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    AllenInstitute/cell_type_mapper’s past year of commit activity
    Python 21 4 5 2 Updated Jan 24, 2025
  • npc_sessions Public

    Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.

    AllenInstitute/npc_sessions’s past year of commit activity
    Python 1 1 53 (3 issues need help) 0 Updated Jan 23, 2025
  • np_pipeline_qc Public Forked from corbennett/NP_pipeline_QC
    AllenInstitute/np_pipeline_qc’s past year of commit activity
    Python 0 3 4 0 Updated Jan 23, 2025
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    AllenInstitute/npc_lims’s past year of commit activity
    Python 0 MIT 0 3 0 Updated Jan 23, 2025
  • scrattch.mapping Public

    Genearlized mapping scripts for RNA-seq and Patch-seq data

    AllenInstitute/scrattch.mapping’s past year of commit activity
    R 11 2 8 0 Updated Jan 23, 2025
View all repositories

Most used topics

Loading…