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Thank you for the great package.
I have noticed the implementation of gg.cor produces incorrect results!
eg. When you provide gene1 = "TCF7" and gene2 = "IFNG", it will produce an identical plot as gene1 = "IFNG" and gene2 = "TCF7"
I believe this is a result of using "subset" function which sorts the data frame and you "hard-code" the columns used for x and y in the ggplot function.
The text was updated successfully, but these errors were encountered:
Thank you for the great package.
I have noticed the implementation of gg.cor produces incorrect results!
eg. When you provide gene1 = "TCF7" and gene2 = "IFNG", it will produce an identical plot as gene1 = "IFNG" and gene2 = "TCF7"
I believe this is a result of using "subset" function which sorts the data frame and you "hard-code" the columns used for x and y in the ggplot function.
The text was updated successfully, but these errors were encountered: