Repositories list

• ClinicianCoders

  Public
  R for Reproducible Scientific Analysis - adapted for ClinicianCoders

  R

  •

  Other

  •541•4•1•0•Updated Mar 6, 2025Mar 6, 2025

• git-novice

  Public
  Software Carpentry introduction to Git for novices.

  HTML

  •

  Other

  •933•3•2•0•Updated Dec 10, 2024Dec 10, 2024

• CodeClubs

  Public
  Gather together a group to skill-share, co-work, and create community

  JavaScript

  •

  Other

  •531•0•2•0•Updated Nov 13, 2024Nov 13, 2024

• UK-climate-by-mp

  Public
  hex maps

  Jupyter Notebook

  •2•5•0•0•Updated Sep 14, 2024Sep 14, 2024

• tus-rec-challenge_baseline

  Public
  This is the official baseline code for TUS-REC Challenge - MICCAI2024

  Python

  •3•0•0•0•Updated Jun 22, 2024Jun 22, 2024

• swiftsim

  Public
  Modern astrophysics and cosmology particle-based code. Mirror of gitlab developments at https://gitlab.cosma.dur.ac.uk/swift/swiftsim

  C

  •

  GNU Lesser General Public License v3.0

  •59•0•10•0•Updated Nov 17, 2023Nov 17, 2023

• EuroCORDEX-UK-plot-explorer

  Public
  This website displays plots showing bias analysis in different climate models.

  2•0•0•0•Updated Nov 1, 2023Nov 1, 2023

• swiftsimio

  Public
  Python library for reading SWIFT data. Uses unyt and h5py.

  Python

  •

  GNU Lesser General Public License v3.0

  •12•0•0•0•Updated Oct 20, 2023Oct 20, 2023

• cppflow

  Public
  Run TensorFlow models in C++ without installation and without Bazel

  C++

  •

  MIT License

  •178•1•1•0•Updated Oct 2, 2023Oct 2, 2023

• install-tensorflow-action

  Public
  Install TensorFlow as a step in a GitHub workflow.

  Shell

  •1•0•0•1•Updated May 10, 2023May 10, 2023

• BSP-isobenefit-original

  Public
  Python

  •

  Other

  •3•1•0•0•Updated Apr 7, 2023Apr 7, 2023

• BSP-future-urban-sim

  Public
  Future Urban Sim

  Python

  •

  GNU Affero General Public License v3.0

  •1•0•0•0•Updated Feb 3, 2023Feb 3, 2023

• CMakeHelloWorld

  Public
  C++ Hello world project using CMake. The point is to test your compiler chain, with a minimal example.

  C++

  •18•0•0•0•Updated Jan 13, 2023Jan 13, 2023

• InnerEye-Inference

  Public
  Enables inference and deployment of InnerEye-DeepLearning (https://github.com/microsoft/InnerEye-deeplearning) models as an async REST API on Azure

  Python

  •

  MIT License

  •11•0•0•0•Updated Dec 12, 2022Dec 12, 2022

• InnerEye-DeepLearning

  Public
  Medical Imaging Deep Learning library to train and deploy 3D segmentation models on Azure Machine Learning

  Python

  •

  MIT License

  •144•0•0•0•Updated Nov 7, 2022Nov 7, 2022

• pulseq

  Public
  Open source framework for pulse sequences

  MATLAB

  •

  Other

  •86•0•0•0•Updated Sep 20, 2022Sep 20, 2022

• Federated-Learning-PyTorch

  Public
  Implementation of Communication-Efficient Learning of Deep Networks from Decentralized Data

  Python

  •

  MIT License

  •451•0•1•0•Updated Jul 22, 2022Jul 22, 2022

• MEF-metabolism

  Public template
  2•0•0•0•Updated Jun 9, 2022Jun 9, 2022

• pymeshfix

  Public
  Python Wrapper for MeshFix: easily repair holes in surface meshes

  C++

  •

  GNU General Public License v3.0

  •30•0•0•0•Updated May 9, 2022May 9, 2022

• ci-configuration-examples

  Public
  This repository makes it easy to run your MATLAB tests on some of the most common CI platforms. The configuration files take care of setting up MATLAB and automatically executing your MATLAB tests.

  MATLAB

  •

  Other

  •294•0•0•0•Updated May 5, 2022May 5, 2022

• CMakeCatch2

  Public template
  Template C++ project using CMake, CTest and Catch2. Useful as a simple place to start to get a reasonable project structure.

  C++

  •

  BSD 3-Clause "New" or "Revised" License

  •6•0•0•0•Updated Feb 17, 2022Feb 17, 2022

• CMakeCatchOpenMP

  Public
  Based on CMakeCatch2 - but with OpenMP examples

  C++

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•0•0•Updated Jan 20, 2022Jan 20, 2022

• CMakeTemplateRenamer

  Public
  Contains a bash script to rename our C++ template projects listed here.

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•0•0•Updated Jan 20, 2022Jan 20, 2022

• recipes

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Jan 20, 2022Jan 20, 2022

• CMakeLibraryAndApp

  Public
  C++ teaching example to show how files are compiled, grouped into libraries and linked into an application.

  C++

  •8•0•0•1•Updated Jan 19, 2022Jan 19, 2022

• xclim

  Public
  Library of derived climate variables, ie climate indicators, based on xarray.

  Python

  •

  Apache License 2.0

  •61•0•0•0•Updated Jan 12, 2022Jan 12, 2022

• npy-matlab

  Public
  Experimental code to read/write NumPy .NPY files in MATLAB

  Jupyter Notebook

  •

  BSD 2-Clause "Simplified" License

  •215•0•0•0•Updated Oct 21, 2021Oct 21, 2021

• scikit-surgery

  Public
  scikit-surgery - Surgical Navigation Libraries for Python

  Python

  •

  Other

  •12•8•0•0•Updated Sep 23, 2021Sep 23, 2021

• comp0037

  Public
  ROS packages for comp0037

  C++

  •

  BSD 3-Clause "New" or "Revised" License

  •17•4•0•0•Updated Dec 30, 2020Dec 30, 2020

• simpleTorch

  Public
  This repo aims to train neural networks with pytorch. The data are normalized insede the class. The validation is performed automatically. The output model gets the unscaled data and returns the output unscaled (The scaling is performed inside). This way the user do not interact the scaling,; however the user can select to not use the default sc…

  Jupyter Notebook

  •

  Other

  •2•0•0•0•Updated Aug 18, 2020Aug 18, 2020