DESCRIPTION

Package: SignallingSingleCell
Type: Package
Title: Network Analysis for single cell RNA sequencing Data (sc-RNASeq)
Version: 0.01
Author: Kyle Gellatly, UMASS Medical School, Garber Lab
Maintainer: Kyle Gellatly <kyle.gellatly@umassmed.edu>
Description: Preprocessing, Normalization, Dimensionality Reduction, Clustering, and Network Analysis for single cell RNA Sequencing Data
License: What license is it under?
Encoding: UTF-8
LinkingTo: Rcpp
LazyData: true
Depends:
    R (>= 2.10.0),
    methods,
    Matrix (>= 1.2-6),
    Biobase,
    ggplot2 (>= 1.0.0),
    viridis,
    igraph
Imports:
    irlba,
    fastICA,
    Rtsne,
    kknn,
    MASS,
    limSolve,
    ggridges,
    densityClust,
    mgcv,
    edgeR,
    caret,
    visNetwork,
    grid,
    gtable,
    SingleCellExperiment, 
    scran, 
    scater
biocViews: Single Cell, Networking
VignetteBuilder: knitr
RoxygenNote: 7.1.1
Suggests: knitr,
    rmarkdown