You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
Hello, I'm not sure how the program works, but I found that some PPR proteins aparently does not recognize the PPR domains. I worked with GUN1, SVR7 and SOT1 from Arabidopsis, but only in SVR7 recognizes the PPR domains. I obtain this error with GUN1 and SOT1: ---------------------------------------------------------------------------
AssertionError Traceback (most recent call last) in <cell line: 52>()
61 data = pickle.load(open(f'{RES_DIR_PICKLE}/{s}.pkl','rb'))
62 scores+=[sc for p in data for sc in [p.annotations["PS_SCORE"]]]
---> 63 assert len(scores)!=0,f'Ohhhhh it seems like no PPR motif are detected by {program} !'
64 print(f'score minima: {min(scores)}')
65 print(f'score maxima: {max(scores)}')
AssertionError: Ohhhhh it seems like no PPR motif are detected by PS_Scan !
Could you please help me. Thanks a lot
The text was updated successfully, but these errors were encountered:
Details
Hello, I'm not sure how the program works, but I found that some PPR proteins aparently does not recognize the PPR domains. I worked with GUN1, SVR7 and SOT1 from Arabidopsis, but only in SVR7 recognizes the PPR domains. I obtain this error with GUN1 and SOT1: ---------------------------------------------------------------------------
AssertionError Traceback (most recent call last)
in <cell line: 52>()
61 data = pickle.load(open(f'{RES_DIR_PICKLE}/{s}.pkl','rb'))
62 scores+=[sc for p in data for sc in [p.annotations["PS_SCORE"]]]
---> 63 assert len(scores)!=0,f'Ohhhhh it seems like no PPR motif are detected by {program} !'
64 print(f'score minima: {min(scores)}')
65 print(f'score maxima: {max(scores)}')
AssertionError: Ohhhhh it seems like no PPR motif are detected by PS_Scan !
Could you please help me. Thanks a lot
The text was updated successfully, but these errors were encountered: