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When calling nviz.image.tiff_to_ometiff I get the following error:
ValueError Traceback (most recent call last)
Cell In[32], [line 32](vscode-notebook-cell:?execution_count=32&line=32)
[30](vscode-notebook-cell:?execution_count=32&line=30) if labels_data:
[31](vscode-notebook-cell:?execution_count=32&line=31) labels_data = np.stack(labels_data, axis=0)
---> [32](vscode-notebook-cell:?execution_count=32&line=32) combined_data = np.concatenate((images_data, labels_data), axis=0)
[33](vscode-notebook-cell:?execution_count=32&line=33) combined_channel_names = channel_names + label_names
[34](vscode-notebook-cell:?execution_count=32&line=34) else:
ValueError: all the input arrays must have same number of dimensions, but the array at index 0 has 5 dimension(s) and the array at index 1 has 4 dimension(s)
Upon diving in, I found that the raw images were in the format of (c,z,y,t) and the label images were in the format of zyt
Would you like to work on a solution for this?
Yes I am willing to submit a PR for this!
The text was updated successfully, but these errors were encountered:
Is this a duplicate of an existing idea for this project?
What is your idea?
When calling
nviz.image.tiff_to_ometiff
I get the following error:Upon diving in, I found that the raw images were in the format of
(c,z,y,t)
and the label images were in the format ofzyt
Would you like to work on a solution for this?
The text was updated successfully, but these errors were encountered: