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I am working on the ENA / Fair Data Station / MIxS alignment and dived into the rabbit hole of examples. This ticket is more for a work in progress and to create a branch to work on this issue.
for example host_disease_stat has multiple examples from different classes. e.g. rabies [DOID:11260]measles [DOID:8622] but the slot itself has none
host_disease_stat:
annotations:
Expected_value: disease name or Disease Ontology term
description: List of diseases with which the host has been diagnosed; can include
multiple diagnoses. The value of the field depends on host; for humans the terms
should be chosen from the DO (Human Disease Ontology) at https://www.disease-ontology.org,
non-human host diseases are free text
title: host disease status
in_subset:
- nucleic acid sequence source
keywords:
- disease
- host
- host.
- status
string_serialization: '{termLabel} [{termID}]|{text}'
slot_uri: MIXS:0000031
I am working on a script that will add all examples from the classes to the slot and then validates this as well when possible.
Its a work in progress and already thanks @turbomam for the slack conversations.
The text was updated successfully, but these errors were encountered:
I am working on the ENA / Fair Data Station / MIxS alignment and dived into the rabbit hole of examples. This ticket is more for a work in progress and to create a branch to work on this issue.
for example
host_disease_stat
has multiple examples from different classes. e.g.rabies [DOID:11260]
measles [DOID:8622]
but the slot itself has noneI am working on a script that will add all examples from the classes to the slot and then validates this as well when possible.
Its a work in progress and already thanks @turbomam for the slack conversations.
The text was updated successfully, but these errors were encountered: