srt.yml

# CIME scripts regression tests

name: scripts regression tests

# Controls when the action will run. Triggers the workflow on push or pull request
# events but only for the master branch
on:
  push:
    branches:  [ main ] 
  pull_request:
    branches: [ main ]

# A workflow run is made up of one or more jobs that can run sequentially or in parallel
jobs:
  # This workflow contains a single job called "build"
  build:
    # The type of runner that the job will run on
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: [3.8, 3.9, 3.11]
    env:
      CC: mpicc
      FC: mpifort
      CXX: mpicxx
      CPPFLAGS: "-I/usr/include -I/usr/local/include"
      CIME_TEST_PLATFORM: ubuntu-latest
      # Versions of all dependencies can be updated here
      PNETCDF_VERSION: pnetcdf-1.12.3
      NETCDF_FORTRAN_VERSION: v4.6.0
      MCT_VERSION: MCT_2.11.0
      PARALLELIO_VERSION: pio2_6_2
      NETCDF_C_PATH: /usr
      NETCDF_FORTRAN_PATH: ${HOME}/netcdf-fortran
      PNETCDF_PATH: ${HOME}/pnetcdf
      CIME_MODEL: cesm
      CIME_DRIVER: nuopc

    # Steps represent a sequence of tasks that will be executed as part of the job
    steps:
      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it

      - name: cime checkout
        uses: actions/checkout@v3
        with:
          repository: ESMCI/cime
          submodules: True
#      - name: genf90 checkout
#        uses: actions/checkout@v2
#        with:
#          repository: PARALLELIO/genf90
#          path: CIME/non_py/externals/genf90

      - name: ccs_config checkout
        uses: actions/checkout@v3
        with:
          repository: ESMCI/ccs_config_cesm
          path: ccs_config

      - name: share checkout
        uses: actions/checkout@v3
        with:
          repository: ESCOMP/CESM_share
          path: share

      - name: cmeps checkout
        uses: actions/checkout@v3
        with:
          repository: ESCOMP/CMEPS
          path: components/cmeps

      - name: cdeps checkout
        uses: actions/checkout@v3
        with:
          repository: ESCOMP/CDEPS
          path: components/cdeps

      - id: load-env
        run: |
          sudo apt-get update
          sudo apt-get install libxml2-utils pylint wget gfortran openmpi-bin netcdf-bin libopenmpi-dev cmake libnetcdf-dev

      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v4
        with:
          python-version: ${{ matrix.python-version }}
          cache: 'pip'

      - name: pip install
        run: pip install PyYAML
        
      - name: mct install
        run: |
          git clone -b ${{ env.MCT_VERSION  }} https://github.com/MCSclimate/MCT libraries/mct
          ls -l libraries/mct

      - name: parallelio install
        run: |
          git clone -b ${{ env.PARALLELIO_VERSION  }} https://github.com/NCAR/ParallelIO libraries/parallelio
          ls -l libraries/parallelio

      - name: cache pnetcdf
        id: cache-pnetcdf
        uses: actions/cache@v3
        with:
          path: ~/pnetcdf
          key: ${{ runner.os }}-${{ env.PNETCDF_VERSION}}-pnetcdf-redo

      - name: pnetcdf build
        if: steps.cache-pnetcdf.outputs.cache-hit != 'true'
        run: |
          wget https://parallel-netcdf.github.io/Release/${{ env.PNETCDF_VERSION }}.tar.gz
          tar -xzvf ${{ env.PNETCDF_VERSION }}.tar.gz
          ls -l
          pushd ${{ env.PNETCDF_VERSION }}
          ./configure --prefix=$HOME/pnetcdf --enable-shared --disable-cxx
          make
          make install
          popd

      - name: Cache netcdf-fortran
        id: cache-netcdf-fortran
        uses: actions/cache@v3
        with:
          path: ~/netcdf-fortran
          key: ${{ runner.os }}-${{ env.NETCDF_FORTRAN_VERSION }}-netcdf-fortran-redo

      - name: netcdf fortran build
        if: steps.cache-netcdf-fortran.outputs.cache-hit != 'true'
        run: |
          sudo apt-get install libnetcdf-dev
          wget https://github.com/Unidata/netcdf-fortran/archive/${{ env.NETCDF_FORTRAN_VERSION }}.tar.gz
          tar -xzvf ${{ env.NETCDF_FORTRAN_VERSION }}.tar.gz
          ls -l
          pushd netcdf-fortran-*
          ./configure --prefix=$HOME/netcdf-fortran
          make
          make install

      - name: link netcdf-c to netcdf-fortran path
        # link netcdf c library here to simplify build
        run: |
          pushd ${{ env.NETCDF_FORTRAN_PATH }}/include
          ln -fs /usr/include/*netcdf* .
          pushd ${{ env.NETCDF_FORTRAN_PATH }}/lib
          clibdir=`nc-config --libdir`
          ln -fs $clibdir/lib* .

      - name: Cache inputdata
        if: ${{ ! env.ACT }}
        uses: actions/cache@v3
        with:
          path: $HOME/cesm/inputdata
          key: inputdata
#
#      The following can be used to ssh to the testnode for debugging
#      see https://github.com/mxschmitt/action-tmate for details
#      - name: Setup tmate session
#        uses: mxschmitt/action-tmate@v3

      - name: scripts regression tests
        run: |
          mkdir -p $HOME/cesm/scratch
          mkdir -p $HOME/cesm/inputdata
          cd $HOME/work/CESM_share/CESM_share
          ls -l $HOME/work/CESM_share/CESM_share
          export NETCDF=$HOME/netcdf-fortran
          export PATH=$NETCDF/bin:$PATH
          export LD_LIBRARY_PATH=$NETCDF/lib:$HOME/pnetcdf/lib:$LD_LIBRARY_PATH
          python -m pip install pytest pytest-cov
          pytest -vvv --no-fortran-run --compiler gnu --mpilib openmpi --machine ubuntu-latest

#     the following can be used by developers to login to the github server in case of errors
#     see https://github.com/marketplace/actions/debugging-with-tmate for further details
#      - name: Setup tmate session
#        if: ${{ failure() }}
#        uses: mxschmitt/action-tmate@v3